Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874093.1_cds_XP_016435380.1_31346
CDS Infomation

[gene=LOC107761649] [db_xref=GeneID:107761649] [protein=probable GTP diphosphokinase RSH2, chloroplastic] [protein_id=XP_016435380.1] [location=join(26442..27140,27237..27422,28094..28554,28919..29077,29153..29504,29642..29941)] [gbkey=CDS]
Sequence

ATGGCGGTTCCGACGATAGCACTGTACGCAAGTCCACCGAGTAGTGTGTGTTCCACGCCG
TATCCATGTCAGATCAATTCACACGGGTCGTATGATTTTGATTTGAACGGCAGATCATCG
TCGTCATCTTCAACCTCGTCTTCGTCCGGTAAATCATTTGTCGGAGGGCTATCCAGTCTG
TTCTCTTCGCCGACAGTGAAGGCGAATTATTCGACAGGGACAGAGGATTTGGGTTCTTTG
TGGCACGATAGAGGTGACGAATTGAGCAGCTCGTTTCGTTGTTCATCCCTTAGCTCGTCG
TTAAAAAGGGATCAGAGTCCAGTTTCTGTTTTTCAAGGACCTGCTAGCACTAGTAGTAGT
GGGATTGGATCATGTTCTAGAAGTCCGCCGAGGAGAATTGCTGGGGATGTGGGGTCCATT
CGTTCTGGGACTGGTGGATTGTTCAATGGATTCGTTAGGCACGCTTTAGGATCCTGCGTT
GATCACGATCCGACGACATTTCGAGTCCTGGATGTGGATTCCCCTTCATCAGGGTTACTG
GATGAACTTACCTTTAACATGGAGGAAGGTTTCTTGGAGTCCAATTCGGAACCTTATGCG
AAAGATTTGCTGTTGAATGCACAGTCGAGGCATAAAATCTTTTATGATGATTTTGTGATT
AAGGCATTTTATGAAGCTGAGAAAGCACATAGAGGACAGGTGCGAGCAAGTGGTGATCCT
TATTTGCAGCATTGCGTTGAGACTGCAGTTTTACTTGCAATGATTGGAGCTAACTCGACT
GTCGTTGCTGCTGGACTTCTGCACGATACGCTTGATGACACGTTCATGACTTATGACTAT
ATTTTCCGGACGTTAGGCGCTGGGGTTGCTGATTTGGTTGAAGGGGTGTCGAAGCTTAGT
CAATTGAGCAAGCTTGCACGAGACTTCAATACAGCTAGTAAAACTGTTGAGGCAGATCGA
TTGCACACCATGTTCCTTGCTATGGCAGATGCCAGGGCAGTTCTCATAAAGCTAGCTGAT
CGCTTGCATAATATGATGACTTTGGATGCGTTGCCATTGGCAAAGCAACAAAGATTTGCA
AAGGAAACTTTGGAAATCTTTGCTCCTCTTGCGAATCGCTTAGGCATCTCAACGTGGAAG
GAGCAGCTGGAAAACCTCTGCTTTAAGCATCTTAACCCAGATCAGCACAATGAGCTCTCG
TCGAAACTTGTTAAGTCTTTTGATGAGGCTATGATTACTTCTTCCGTGGGGAAATTGGAG
CAAGCGCTAAAGGATGACTCTGTTTCTTATCATGTTCTCTCGGGCCGTCACAAGAGCTTG
TACAGCATTTACTGCAAGATGCTAAAGAAGAAGCTTAATATGGATGAAGTCCATGACATT
CATGGGTTAAGGTTGATAGTTGAAAATAAAGAAGACTGTTATAAAGCACTTCGAGTCGTT
CACCAGCTATGGAGTGAAGTACCTGGGAGATACAAGGACTATATAGCAAATCCAAAATTC
AACGGGTACCAATCTCTTCATACGGTTGTGCTCGGGGAAGGCATGGTGCCTCTTGAAGTT
CAGATCCGGACAAAGGAGATGCACTTGCAAGCTGAATATGGTTTCGCTGCTCATTGGAGA
TACAAGGAAGGCGCTTGCAAACACTCTTCTTTTGTAAATCAGATGGTAGAGTGGGCTCGC
TGGGTTGTTACCTGGCAGTGTGAGACAATGAACAGAGACCAATCATCTGTTGGCCACACT
GAATCTATTCAGCCACCTTGCAAATTCCCTGCTCATTCTGAAGATTGTCCATTTTCTTGC
AAACCTAATTGTGGAACTGATGGACCTGTCTTTATCATTATGATTGACAACGATAAGATG
TCTGTGCAAGAATTCCCTGCAAACTCAACTGTCAAGGATCTTTTGGAGAGAGCTGGTCGC
GGCAGTTCTAGATGGACACCCTATGGATTTCCACTGAAAGAAGAGCTAAGGCCAAGATTG
AACCATGAACCAGTCAGTGATCCCAACTGCAAGCTAAGAATGGGAGATGTTATAGAATTA
ACTCCAGCTATACCACATAAGTCATTGACCGAGTACAGAGAGGAGATCCAGCGAATGTAT
GATCGAGGTGTAAGCCCTCTTCCTGCTGCCAATGCAGTAGTTGGTCTGAGGAGTTGA

Peptide Sequence

PEP ID

XP_016435380.1
PEP Infomation

PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Nicotiana tabacum]
Sequence

MAVPTIALYASPPSSVCSTPYPCQINSHGSYDFDLNGRSSSSSSTSSSSGKSFVGGLSSL
FSSPTVKANYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDQSPVSVFQGPASTSSS
GIGSCSRSPPRRIAGDVGSIRSGTGGLFNGFVRHALGSCVDHDPTTFRVLDVDSPSSGLL
DELTFNMEEGFLESNSEPYAKDLLLNAQSRHKIFYDDFVIKAFYEAEKAHRGQVRASGDP
YLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADLVEGVSKLS
QLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLAKQQRFA
KETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLVKSFDEAMITSSVGKLE
QALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENKEDCYKALRVV
HQLWSEVPGRYKDYIANPKFNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAEYGFAAHWR
YKEGACKHSSFVNQMVEWARWVVTWQCETMNRDQSSVGHTESIQPPCKFPAHSEDCPFSC
KPNCGTDGPVFIIMIDNDKMSVQEFPANSTVKDLLERAGRGSSRWTPYGFPLKEELRPRL
NHEPVSDPNCKLRMGDVIELTPAIPHKSLTEYREEIQRMYDRGVSPLPAANAVVGLRS

Transcript Sequence

Gene sequence data has not been registered.